ENSMUSG00000039835


Mus musculus

Features
Gene ID: ENSMUSG00000039835
  
Biological name :Nhsl1
  
Synonyms : Nhsl1 / NHS-like protein 1 / Q8CAF4
  
Possible biological names infered from orthology : NHS like 1 / Q5SYE7
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: A3
Gene start: 18318985
Gene end: 18533892
  
Corresponding Affymetrix probe sets: 10361869 (MoGene1.0st)   10361882 (MoGene1.0st)   1426934_at (Mouse Genome 430 2.0 Array)   1430810_at (Mouse Genome 430 2.0 Array)   1433111_at (Mouse Genome 430 2.0 Array)   1438904_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000147021
Ensembl peptide - ENSMUSP00000040799
Ensembl peptide - ENSMUSP00000097631
Ensembl peptide - ENSMUSP00000124072
NCBI entrez gene - 215819     See in Manteia.
MGI - MGI:106390
RefSeq - XM_006512691
RefSeq - XM_006512686
RefSeq - XM_006512687
RefSeq - XM_006512688
RefSeq - XM_006512689
RefSeq - XM_006512690
RefSeq - NM_001163592
RefSeq - NM_173390
RefSeq Peptide - NP_001157064
RefSeq Peptide - NP_775566
swissprot - E0CYL9
swissprot - Q8CAF4
swissprot - A0A140LIZ7
Ensembl - ENSMUSG00000039835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nhsl1aENSDARG00000054537Danio rerio
 nhsl1bENSDARG00000042627Danio rerio
 NHSL1ENSGALG00000026981Gallus gallus
 NHSL1ENSG00000135540Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Nhs / NHS actin remodeling regulator / Q6T4R5*ENSMUSG0000005949324
Nhsl2 / NHS like 2 / Q5HYW2*ENSMUSG0000007948116


Protein motifs (from Interpro)
Interpro ID Name
 IPR024845  Nance-Horan syndrome protein family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0097475 motor neuron migration IBA
 cellular_componentGO:0016020 membrane IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011967 increased or absent threshold for auditory brainstem response "increase in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency or broadband click" [MGI:csmith]
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Allelic Composition: Ncoa3tm1b(EUCOMM)Wtsi/Ncoa3+
Genetic Background: C57BL/6N-Ncoa3tm1b(EUCOMM)Wtsi/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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