ENSDARG00000042661


Danio rerio

Features
Gene ID: ENSDARG00000042661
  
Biological name :zgc:110348
  
Synonyms : zgc:110348 / zgc:173683
  
Possible biological names infered from orthology : P23591 / Q13630 / tissue specific transplantation antigen P35B / TSTA3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 48739154
Gene end: 48775067
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062577
Ensembl peptide - ENSDARP00000091035
NCBI entrez gene - 550486     See in Manteia.
NCBI entrez gene - 100126119     See in Manteia.
RefSeq - NM_001109847
RefSeq - XM_005160878
RefSeq Peptide - NP_001103317
swissprot - F1QDP3
swissprot - B0S7C9
ZFIN ID - ZDB-GENE-050417-317
ZFIN ID - ZDB-GENE-071004-107
Ensembl - ENSDARG00000042661
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSTA3ENSGALG00000031525Gallus gallus
 TSTA3ENSG00000104522Homo sapiens
 Tsta3ENSMUSG00000022570Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tsta3 / tissue specific transplantation antigen P35B / P23591* / Q13630*ENSDARG0000003966679
zgc:100864 / TSTA3 (1 of many) / TSTA3* / P23591* / Q13630* / tissue specific transplantation antigen P35B*ENSDARG0000003966971


Protein motifs (from Interpro)
Interpro ID Name
 IPR001509  NAD-dependent epimerase/dehydratase
 IPR016040  NAD(P)-binding domain
 IPR028614  GDP-L-fucose synthase/GDP-L-colitose synthase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009226 nucleotide-sugar biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0050662 coenzyme binding IEA


Pathways (from Reactome)
Pathway description
GDP-fucose biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000039666 tsta3 / tissue specific transplantation antigen P35B / P23591* / Q13630*  / complex
 ENSDARG00000039669 zgc:100864 / TSTA3 (1 of many) / TSTA3* / P23591* / Q13630* / tissue specific transplantation antigen P35B*  / complex
 ENSDARG00000042661 zgc:173683 / zgc:110348 / TSTA3* / P23591* / Q13630* / tissue specific transplantation antigen P35B*  / complex






 

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