ENSDARG00000042840


Danio rerio

Features
Gene ID: ENSDARG00000042840
  
Biological name :eml1
  
Synonyms : echinoderm microtubule associated protein like 1 / eml1
  
Possible biological names infered from orthology : O00423 / Q05BC3
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 30976484
Gene end: 31082381
  
Corresponding Affymetrix probe sets: Dr.5845.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000137688
Ensembl peptide - ENSDARP00000149673
Ensembl peptide - ENSDARP00000148944
Ensembl peptide - ENSDARP00000148317
Ensembl peptide - ENSDARP00000095082
Ensembl peptide - ENSDARP00000104791
Ensembl peptide - ENSDARP00000117339
Ensembl peptide - ENSDARP00000126354
NCBI entrez gene - 767643     See in Manteia.
RefSeq - NM_001193598
RefSeq Peptide - NP_001180527
swissprot - A0A0R4INC0
swissprot - K7DY28
swissprot - Q08CG7
swissprot - E9QE67
swissprot - E7EXY5
ZFIN ID - ZDB-GENE-060929-156
Ensembl - ENSDARG00000042840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000039735Gallus gallus
 ENSGALG00000043661Gallus gallus
 EML1ENSG00000066629Homo sapiens
 Eml1ENSMUSG00000058070Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eml2 / echinoderm microtubule associated protein like 2 / O95834* / Q7TNG5* / Mus musculus echinoderm microtubule associated protein like 2 (Eml2), transcript variant 3, mRNA.*ENSDARG0000000880862
CABZ01087623.1 / EML4* / Q9HC35* / echinoderm microtubule associated protein like 4*ENSDARG0000010944352
eml3 / echinoderm microtubule associated protein like 3 / Q32P44* / Q8VC03*ENSDARG0000005803848
EML5 / si:dkey-1f12.3 / Q05BV3* / Q8BQM8* / echinoderm microtubule associated protein like 5*ENSDARG0000005351731
CABZ01069998.1 / EML6* / Q6ZMW3* / echinoderm microtubule associated protein like 6*ENSDARG0000010275530


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR005108  HELP
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0036368 cone photoresponse recovery IMP
 cellular_componentGO:0015630 microtubule cytoskeleton IBA
 molecular_functionGO:0008017 microtubule binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009262 retinal cone cell retinal cone cell photosensitive , abnormal
retinal cone cell detection of light stimulus involved in visual perception increased process quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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