ENSDARG00000053517


Danio rerio

Features
Gene ID: ENSDARG00000053517
  
Biological name :EML5
  
Synonyms : EML5 / si:dkey-1f12.3
  
Possible biological names infered from orthology : echinoderm microtubule associated protein like 5 / Q05BV3 / Q8BQM8
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 43039463
Gene end: 43287290
  
Corresponding Affymetrix probe sets: Dr.4927.1.A1_at (Zebrafish Array)   XM_693439_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000143477
Ensembl peptide - ENSDARP00000127915
NCBI entrez gene - 570011     See in Manteia.
RefSeq - XM_693439
swissprot - X1WCH2
swissprot - A0A286Y8K5
ZFIN ID - ZDB-GENE-030131-1677
Ensembl - ENSDARG00000053517
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000032424Gallus gallus
 ENSGALG00000010639Gallus gallus
 EML5ENSG00000165521Homo sapiens
 Eml5ENSMUSG00000051166Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01069998.1 / EML6* / Q6ZMW3* / echinoderm microtubule associated protein like 6*ENSDARG0000010275563
eml1 / echinoderm microtubule associated protein like 1 / O00423* / Q05BC3*ENSDARG0000004284013
CABZ01087623.1 / EML4* / Q9HC35* / echinoderm microtubule associated protein like 4*ENSDARG0000010944313
eml3 / echinoderm microtubule associated protein like 3 / Q32P44* / Q8VC03*ENSDARG0000005803812
eml2 / echinoderm microtubule associated protein like 2 / O95834* / Q7TNG5* / Mus musculus echinoderm microtubule associated protein like 2 (Eml2), transcript variant 3, mRNA.*ENSDARG0000000880812


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR005108  HELP
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0015630 microtubule cytoskeleton IBA
 molecular_functionGO:0008017 microtubule binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr