ENSDARG00000043328


Danio rerio

Features
Gene ID: ENSDARG00000043328
  
Biological name :fip1l1a
  
Synonyms : fip1l1a / FIP1 like 1a (S. cerevisiae)
  
Possible biological names infered from orthology : AC058822.1 / factor interacting with PAPOLA and CPSF1 / FIP1L1 / Pre-mRNA 3-end-processing factor FIP1 / Q6UN15 / Q9D824
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 22739792
Gene end: 22798794
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000118281
Ensembl peptide - ENSDARP00000126622
NCBI entrez gene - 561900     See in Manteia.
swissprot - Q5RHJ8
swissprot - R4GDR6
ZFIN ID - ZDB-GENE-041014-8
Ensembl - ENSDARG00000043328
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000013943Gallus gallus
 AC058822.1ENSG00000282278Homo sapiens
 FIP1L1ENSG00000145216Homo sapiens
 Fip1l1ENSMUSG00000029227Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fip1l1b / FIP1 like 1b (S. cerevisiae) / FIP1L1* / Q6UN15* / AC058822.1* / factor interacting with PAPOLA and CPSF1*ENSDARG0000007043154


Protein motifs (from Interpro)
Interpro ID Name
 IPR007854  Pre-mRNA polyadenylation factor Fip1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006378 mRNA polyadenylation IBA
 biological_processGO:0098789 pre-mRNA cleavage required for polyadenylation IBA
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex IBA
 molecular_functionGO:0003723 RNA binding IBA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway
mRNA 3-end processing
Processing of Intronless Pre-mRNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr