ENSDARG00000043388


Danio rerio

Features
Gene ID: ENSDARG00000043388
  
Biological name :atraid
  
Synonyms : A3KNS9 / all-trans retinoic acid-induced differentiation factor / atraid
  
Possible biological names infered from orthology : Q6PGD0 / Q6UW56
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 19512727
Gene end: 19516640
  
Corresponding Affymetrix probe sets: Dr.14144.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000063695
NCBI entrez gene - 553468     See in Manteia.
RefSeq - NM_001044773
RefSeq Peptide - NP_001038238
swissprot - A3KNS9
ZFIN ID - ZDB-GENE-040724-177
Ensembl - ENSDARG00000043388
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATRAIDENSG00000138085Homo sapiens
 AtraidENSMUSG00000013622Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013032  EGF-like, conserved site
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010468 regulation of gene expression ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030501 positive regulation of bone mineralization ISS
 biological_processGO:0033689 negative regulation of osteoblast proliferation ISS
 biological_processGO:0045669 positive regulation of osteoblast differentiation ISS
 biological_processGO:1903363 negative regulation of cellular protein catabolic process ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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