ENSDARG00000043555


Danio rerio

Features
Gene ID: ENSDARG00000043555
  
Biological name :tmem30ab
  
Synonyms : tmem30ab / transmembrane protein 30Ab
  
Possible biological names infered from orthology : Q8VEK0 / Q9NV96 / TMEM30A / transmembrane protein 30A
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 16639848
Gene end: 16660851
  
Corresponding Affymetrix probe sets: Dr.3449.1.S1_at (Zebrafish Array)   NM_205560_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000063943
Ensembl peptide - ENSDARP00000126668
NCBI entrez gene - 333952     See in Manteia.
RefSeq - NM_205560
RefSeq Peptide - NP_991123
swissprot - Q5VSE9
swissprot - R4GDW1
ZFIN ID - ZDB-GENE-030131-5884
Ensembl - ENSDARG00000043555
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM30AENSGALG00000015904Gallus gallus
 Q9NV96ENSG00000112697Homo sapiens
 Q8VEK0ENSMUSG00000032328Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmem30aa / transmembrane protein 30Aa / Q8VEK0* / Q9NV96* / TMEM30A* / transmembrane protein 30A*ENSDARG0000003023683
zgc:91908 / Q3MIR4* / Q8BHG3* / TMEM30B* / transmembrane protein 30B*ENSDARG0000005412249
tmem30c / transmembrane protein 30C / Q9D4D7*ENSDARG0000000943043


Protein motifs (from Interpro)
Interpro ID Name
 IPR005045  CDC50/LEM3 family
 IPR030351  Cell cycle control protein 50A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015914 phospholipid transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr