ENSDARG00000054122


Danio rerio

Features
Gene ID: ENSDARG00000054122
  
Biological name :zgc:91908
  
Synonyms : zgc:91908
  
Possible biological names infered from orthology : Q3MIR4 / Q8BHG3 / TMEM30B / transmembrane protein 30B
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 28102487
Gene end: 28111225
  
Corresponding Affymetrix probe sets: Dr.3370.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000151989
Ensembl peptide - ENSDARP00000070742
Ensembl peptide - ENSDARP00000115898
NCBI entrez gene - 431726     See in Manteia.
RefSeq - NM_001002179
RefSeq - XM_005158776
RefSeq Peptide - NP_001002179
swissprot - Q6GMG4
swissprot - E9QIY6
ZFIN ID - ZDB-GENE-040704-17
Ensembl - ENSDARG00000054122
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q3MIR4ENSG00000182107Homo sapiens
 Q8BHG3ENSMUSG00000034435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmem30ab / transmembrane protein 30Ab / Q8VEK0* / Q9NV96* / TMEM30A* / transmembrane protein 30A*ENSDARG0000004355553
tmem30aa / transmembrane protein 30Aa / Q8VEK0* / Q9NV96* / TMEM30A* / transmembrane protein 30A*ENSDARG0000003023652
tmem30c / transmembrane protein 30C / Q9D4D7*ENSDARG0000000943046


Protein motifs (from Interpro)
Interpro ID Name
 IPR005045  CDC50/LEM3 family
 IPR030352  Cell cycle control protein 50B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr