ENSDARG00000043710


Danio rerio

Features
Gene ID: ENSDARG00000043710
  
Biological name :parvaa
  
Synonyms : parvaa / parvin, alpha a
  
Possible biological names infered from orthology : PARVA / parvin alpha / Q9EPC1
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 16312258
Gene end: 16345430
  
Corresponding Affymetrix probe sets: Dr.1794.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000064186
NCBI entrez gene - 442922     See in Manteia.
RefSeq - NM_001002872
RefSeq Peptide - NP_001002872
swissprot - Q6DRM4
ZFIN ID - ZDB-GENE-040721-2
Ensembl - ENSDARG00000043710
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PARVAENSGALG00000005438Gallus gallus
 PARVAENSG00000197702Homo sapiens
 ParvaENSMUSG00000030770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
parvab / parvin, alpha b / PARVA* / Q9EPC1* / parvin alpha*ENSDARG0000003562987
parvb / parvin, beta / Q9ES46* / Q9HBI1*ENSDARG0000001911766
parvg / parvin, gamma / Q9ERD8* / Q9HBI0* / Gamma-parvin *ENSDARG0000006771129


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain
 IPR028433  Parvin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0031532 actin cytoskeleton reorganization IEA
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000076 swim bladder swim bladder quality , abnormal
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 ZFA:0000292 surface structure surface structure quality , abnormal
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 ZFA:0001058 caudal fin caudal fin morphology , abnormal
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 ZFA:0001604 caudal fin upper lobe caudal fin upper lobe rough , abnormal
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 ZFA:0001605 caudal fin lower lobe caudal fin lower lobe rough , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr