ENSDARG00000043884


Danio rerio

Features
Gene ID: ENSDARG00000043884
  
Biological name :nup43
  
Synonyms : nucleoporin 43 / nup43
  
Possible biological names infered from orthology : Nucleoporin Nup43 / P59235 / Q8NFH3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 1316495
Gene end: 1327859
  
Corresponding Affymetrix probe sets: Dr.16507.1.A1_at (Zebrafish Array)   Dr.16507.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000064438
Ensembl peptide - ENSDARP00000127050
Ensembl peptide - ENSDARP00000127090
swissprot - Q5RFW3
swissprot - R4GEY6
swissprot - R4GF25
ZFIN ID - ZDB-GENE-040426-2533
Ensembl - ENSDARG00000043884
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUP43ENSGALG00000012387Gallus gallus
 NUP43ENSG00000120253Homo sapiens
 Nup43ENSMUSG00000040034Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007507 heart development IMP
 cellular_componentGO:0031080 nuclear pore outer ring IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
Transcriptional regulation by small RNAs
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000114 heart heart linear , abnormal
heart morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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