| ZFA:0000008 | brain | brain quality , abnormal |
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| ZFA:0000012 | central nervous system | central nervous system ventral region decreased size , abnormal |
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| ZFA:0000022 | floor plate | floor plate hypoplastic , abnormal |
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| ZFA:0000095 | pharyngeal arch 3-7 skeleton | pharyngeal arch 3-7 skeleton aplastic , abnormal |
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| ZFA:0000107 | eye | eye quality , abnormal
eye mislocalised medially , abnormal
eye decreased distance eye , abnormal |
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| ZFA:0000135 | notochord | notochord quality , abnormal |
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| ZFA:0000155 | somite | somite quality , abnormal
somite morphology , abnormal |
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| ZFA:0000217 | inner ear | inner ear wholly anterioralized , abnormal
inner ear has extra parts of type anterior macula , abnormal |
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| ZFA:0000282 | sensory system | sensory system quality , abnormal |
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| ZFA:0000368 | integument | integument cell circular , abnormal |
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| ZFA:0000396 | nervous system | nervous system quality , abnormal |
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| ZFA:0000473 | trunk musculature | trunk musculature quality , abnormal |
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| ZFA:0000556 | optic chiasm | optic chiasm aplastic , abnormal |
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| ZFA:0000558 | posterior macula | posterior macula aplastic , abnormal |
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| ZFA:0000671 | horizontal myoseptum | horizontal myoseptum aplastic , abnormal
horizontal myoseptum hypoplastic , abnormal
horizontal myoseptum absent , abnormal |
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| ZFA:0000713 | abducens motor nucleus | abducens motor nucleus absent , abnormal |
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| ZFA:0001089 | myoseptum | myoseptum quality , abnormal |
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| ZFA:0001094 | whole organism | whole organism shape , abnormal
whole organism lethal (sensu genetics) , abnormal
whole organism movement behavioral quality , abnormal
whole organism viability , abnormal
whole organism decreased behavioural activity , abnormal |
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| ZFA:0001114 | head | head retracted , abnormal |
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| ZFA:0001117 | post-vent region | post-vent region curved , abnormal
post-vent region curved ventral , abnormal |
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| ZFA:0001135 | neural tube | neural tube quality , abnormal
neural tube decreased thickness , abnormal |
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| ZFA:0001161 | pectoral fin | pectoral fin morphology , abnormal
pectoral fin decreased size , abnormal |
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| ZFA:0001227 | mandibular arch skeleton | mandibular arch skeleton hypoplastic , abnormal
mandibular arch skeleton joint malformed , abnormal |
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| ZFA:0001276 | pharyngeal arch 2 skeleton | pharyngeal arch 2 skeleton hypoplastic , abnormal
pharyngeal arch 2 skeleton joint malformed , abnormal |
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| ZFA:0001399 | palatoquadrate cartilage | palatoquadrate cartilage malformed , abnormal |
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| ZFA:0001405 | ethmoid cartilage | ethmoid cartilage aplastic , abnormal
ethmoid cartilage hypoplastic , abnormal |
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| ZFA:0001422 | hyosymplectic cartilage | hyosymplectic cartilage malformed , abnormal |
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| ZFA:0001423 | parachordal cartilage | parachordal cartilage fused with parachordal cartilage , abnormal |
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| ZFA:0001424 | chondrocranium | chondrocranium morphology , abnormal |
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| ZFA:0001507 | trabecula cranii | trabecula cranii fused with trabecula cranii , abnormal |
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| ZFA:0001510 | basihyal cartilage | basihyal cartilage aplastic , abnormal |
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| ZFA:0001613 | pharyngeal arch 3-7 | pharyngeal arch 3-7 chondrocyte absent , abnormal |
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| ZFA:0001617 | otolith | otolith decreased size , abnormal |
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| ZFA:0005409 | pars superior ear | pars superior ear has extra parts of type anterior crista , abnormal |
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| ZFA:0009003 | cranial neural crest cell | cranial neural crest cell mislocalised ventrally , abnormal |
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| ZFA:0009052 | motor neuron | motor neuron decreased amount , abnormal |
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| ZFA:0009063 | peripheral neuron | peripheral neuron quality , abnormal |
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| ZFA:0009116 | slow muscle cell | slow muscle cell decreased amount , abnormal |
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| ZFA:0009244 | primary motor neuron | primary motor neuron axon morphology , abnormal
primary motor neuron axon disorganized , abnormal
primary motor neuron axon decreased amount , abnormal |
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| ZFA:0009247 | secondary motor neuron | secondary motor neuron axon absent , abnormal
secondary motor neuron cell body decreased amount , abnormal |
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| ZFA:0009310 | retinal ganglion cell | retinal ganglion cell axon misrouted , abnormal
retinal ganglion cell axon disorganized , abnormal
retinal ganglion cell axon ipsilateral to eye , abnormal
retinal ganglion cell axon displaced to eye , abnormal |
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