ENSDARG00000044488


Danio rerio

Features
Gene ID: ENSDARG00000044488
  
Biological name :pak1ip1
  
Synonyms : PAK1 interacting protein 1 / pak1ip1 / Q6TNS2
  
Possible biological names infered from orthology : p21-activated protein kinase-interacting protein 1 / Q9DCE5 / Q9NWT1
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 36158745
Gene end: 36175365
  
Corresponding Affymetrix probe sets: Dr.5701.1.S1_at (Zebrafish Array)   NM_200945_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000065337
NCBI entrez gene - 336470     See in Manteia.
RefSeq - NM_200945
RefSeq Peptide - NP_957239
swissprot - Q6TNS2
ZFIN ID - ZDB-GENE-030131-8414
Ensembl - ENSDARG00000044488
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PAK1IP1ENSGALG00000012724Gallus gallus
 Q9NWT1ENSG00000111845Homo sapiens
 Q9DCE5ENSMUSG00000038683Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009968 negative regulation of signal transduction IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr