ENSDARG00000044642


Danio rerio

Features
Gene ID: ENSDARG00000044642
  
Biological name :sc5d
  
Synonyms : sc5d / sterol-C5-desaturase
  
Possible biological names infered from orthology : O75845 / O88822
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 24531679
Gene end: 24535510
  
Corresponding Affymetrix probe sets: Dr.9875.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000065599
NCBI entrez gene - 447891     See in Manteia.
RefSeq - NM_001004630
RefSeq Peptide - NP_001004630
swissprot - F1QG97
ZFIN ID - ZDB-GENE-040912-56
Ensembl - ENSDARG00000044642
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SC5DENSGALG00000037065Gallus gallus
 SC5DENSG00000109929Homo sapiens
 Sc5dENSMUSG00000032018Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006694  Fatty acid hydroxylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001878 response to yeast IDA
 biological_processGO:0008610 lipid biosynthetic process IEA
 biological_processGO:0033490 cholesterol biosynthetic process via lathosterol IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000248 C-5 sterol desaturase activity IBA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0050046 lathosterol oxidase activity IBA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis via desmosterol
Cholesterol biosynthesis via lathosterol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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