ENSDARG00000044956


Danio rerio

Features
Gene ID: ENSDARG00000044956
  
Biological name :zgc:114123
  
Synonyms : zgc:114123
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 2728095
Gene end: 2745986
  
Corresponding Affymetrix probe sets: Dr.4410.1.A1_a_at (Zebrafish Array)   Dr.4410.1.A1_x_at (Zebrafish Array)   Dr.4410.2.A1_x_at (Zebrafish Array)   Dr.4410.3.A1_x_at (Zebrafish Array)   NM_001030232_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000116179
Ensembl peptide - ENSDARP00000066085
NCBI entrez gene - 569174     See in Manteia.
RefSeq - NM_001030232
RefSeq Peptide - NP_001025403
swissprot - F1R4T4
swissprot - F1Q966
ZFIN ID - ZDB-GENE-050913-53
Ensembl - ENSDARG00000044956
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000015172Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spire2 / spire-type actin nucleation factor 2 / 2 * / Q8K1S6* / Q8WWL2*ENSDARG0000000308426
Q1LYM3 / spire1a / spire-type actin nucleation factor 1a / 1 * / SPIRE1* / Q52KF3* / Q08AE8* / spire type actin nucleation factor 1*ENSDARG0000003586825
spire1b / spire-type actin nucleation factor 1b / Q08AE8* / SPIRE1* / spire type actin nucleation factor 1*ENSDARG0000003844517


Protein motifs (from Interpro)
Interpro ID Name
 IPR011019  KIND domain
 IPR029901  Protein Spire
 IPR029904  Protein Spire2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0045010 actin nucleation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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