ENSDARG00000045692


Danio rerio

Features
Gene ID: ENSDARG00000045692
  
Biological name :pphln1
  
Synonyms : periphilin 1 / pphln1
  
Possible biological names infered from orthology : 3110001I22Rik / Q8NEY8 / RIKEN cDNA 3110001I22 gene
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 13901458
Gene end: 13963440
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000147045
Ensembl peptide - ENSDARP00000155051
Ensembl peptide - ENSDARP00000067174
Ensembl peptide - ENSDARP00000113377
Ensembl peptide - ENSDARP00000114622
Ensembl peptide - ENSDARP00000116286
Ensembl peptide - ENSDARP00000125587
NCBI entrez gene - 790935     See in Manteia.
RefSeq - NM_001080080
RefSeq Peptide - NP_001073549
swissprot - Q5SP51
swissprot - Q5SP52
swissprot - Q5SP53
swissprot - A5PF35
swissprot - H0WFF5
ZFIN ID - ZDB-GENE-030131-1873
Ensembl - ENSDARG00000045692
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPHLN1ENSGALG00000009547Gallus gallus
 PPHLN1ENSG00000134283Homo sapiens
 3110001I22RikENSMUSG00000079737Mus musculus
 Pphln1ENSMUSG00000036167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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