ENSGALG00000009547


Gallus gallus

Features
Gene ID: ENSGALG00000009547
  
Biological name :PPHLN1
  
Synonyms : periphilin-1 isoform 2 / PPHLN1
  
Possible biological names infered from orthology : 3110001I22Rik / periphilin 1 / Q8NEY8 / RIKEN cDNA 3110001I22 gene
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 29577530
Gene end: 29714435
  
Corresponding Affymetrix probe sets: GgaAffx.12162.1.S1_at (Chicken Array)   GgaAffx.12162.1.S1_s_at (Chicken Array)   GgaAffx.5996.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045810
Ensembl peptide - ENSGALP00000048302
Ensembl peptide - ENSGALP00000015521
NCBI entrez gene - 417792     See in Manteia.
RefSeq - XM_015281233
RefSeq - NM_001030737
RefSeq - NM_001305257
RefSeq Peptide - NP_001025908
RefSeq Peptide - NP_001292186
swissprot - A0A1D5NZJ2
swissprot - A0A1D5P6H5
swissprot - Q5ZKM5
Ensembl - ENSGALG00000009547
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pphln1ENSDARG00000045692Danio rerio
 PPHLN1ENSG00000134283Homo sapiens
 3110001I22RikENSMUSG00000079737Mus musculus
 Pphln1ENSMUSG00000036167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR028851  Periphilin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr