ENSDARG00000045900


Danio rerio

Features
Gene ID: ENSDARG00000045900
  
Biological name :agbl5
  
Synonyms : agbl5 / ATP/GTP binding protein-like 5
  
Possible biological names infered from orthology : Cytosolic carboxypeptidase-like protein 5 / Q09M02 / Q8NDL9
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 737539
Gene end: 760560
  
Corresponding Affymetrix probe sets: Dr.10964.1.A1_at (Zebrafish Array)   NM_001004113_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000094377
NCBI entrez gene - 445479     See in Manteia.
RefSeq - NM_001004113
RefSeq - XM_017355000
RefSeq Peptide - NP_001004113
swissprot - F1QNG5
ZFIN ID - ZDB-GENE-040822-29
Ensembl - ENSDARG00000045900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AGBL5ENSGALG00000038639Gallus gallus
 AGBL5ENSG00000084693Homo sapiens
 Agbl5ENSMUSG00000029165Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
agbl2 / ATP/GTP binding protein-like 2 / Q5U5Z8* / Q8CDK2* / Mus musculus ATP/GTP binding protein-like 2 (Agbl2), transcript variant 2, mRNA.*ENSDARG0000007998317
agtpbp1 / ATP/GTP binding protein 1 / Q641K1* / Q9UPW5* / Cytosolic carboxypeptidase 1 *ENSDARG0000010521417
AGBL1 / si:ch73-141f14.1 / Q09M05* / Q96MI9* / Cytosolic carboxypeptidase 4 * / ATP/GTP binding protein like 1*ENSDARG0000010438414
agbl4 / ATP/GTP binding protein-like 4 / Q5VU57*ENSDARG000000680506
agbl4 / ATP/GTP binding protein-like 4 / Q5VU57*ENSDARG000001108386


Protein motifs (from Interpro)
Interpro ID Name
 IPR000834  Peptidase M14, carboxypeptidase A
 IPR034286  Cytosolic carboxypeptidase-like protein 5 catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0035608 protein deglutamylation IEA
 molecular_functionGO:0004181 metallocarboxypeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
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 ZFA:0000048 olfactory placode olfactory placode morphology , abnormal
olfactory placode decreased size , abnormal
olfactory placode cilium aggregated , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000151 pronephros pronephros cystic , abnormal
pronephros cilium movement process quality , abnormal
pronephros motile cilium paralysed , abnormal
pronephros motile cilium decreased coordination , abnormal
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 ZFA:0001094 whole organism whole organism curved ventral , abnormal
whole organism curved , abnormal
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 ZFA:0001261 ventricular system ventricular system edematous , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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