ENSDARG00000046012


Danio rerio

Features
Gene ID: ENSDARG00000046012
  
Biological name :slc47a1
  
Synonyms : slc47a1 / solute carrier family 47 (multidrug and toxin extrusion), member 1
  
Possible biological names infered from orthology : Multidrug and toxin extrusion protein 1 / Multidrug and toxin extrusion protein 2 / Q3V050 / Q86VL8 / Q8K0H1 / Q96FL8 / SLC47A2 / solute carrier family 47 member 1 / solute carrier family 47 member 2
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 39941184
Gene end: 39976240
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135774
Ensembl peptide - ENSDARP00000157092
Ensembl peptide - ENSDARP00000147802
Ensembl peptide - ENSDARP00000118319
Ensembl peptide - ENSDARP00000118758
Ensembl peptide - ENSDARP00000120491
Ensembl peptide - ENSDARP00000121721
NCBI entrez gene - 541497     See in Manteia.
RefSeq - NM_001014310
RefSeq - XM_021468818
RefSeq Peptide - NP_001014332
swissprot - F1QMK7
swissprot - F1R3J6
swissprot - Q58ED1
swissprot - E9QG70
swissprot - A0A0R4ILJ3
swissprot - F1QKP0
ZFIN ID - ZDB-GENE-050327-20
Ensembl - ENSDARG00000046012
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC47A1ENSGALG00000037828Gallus gallus
 SLC47A2ENSGALG00000004778Gallus gallus
 Q86VL8ENSG00000180638Homo sapiens
 Q96FL8ENSG00000142494Homo sapiens
 Q3V050ENSMUSG00000069855Mus musculus
 Q8K0H1ENSMUSG00000010122Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc47a4 / solute carrier family 47 (multidrug and toxin extrusion), member 4 / Q86VL8* / Q3V050* / Q8K0H1* / Q96FL8* / SLC47A2* / SLC47A1* / solute carrier family 47 member 1* / solute carr...ENSDARG0000007934050
BX248108.1 / Danio rerio multidrug and toxin extrusion protein 1-like (mate4), mRNA. / Q96FL8* / Q86VL8* / SLC47A1* / SLC47A2* / solute carrier family 47 member 1* / solute carrier family 4...ENSDARG0000011430641
A1L1P9 / slc47a2.1 / solute carrier family 47 (multidrug and toxin extrusion), member 2.1 / Q86VL8* / Q3V050* / Q8K0H1* / Q96FL8* / SLC47A2* / SLC47A1* / solute carrier family 47 member 1* ...ENSDARG0000006005140
slc47a3 / solute carrier family 47 (multidrug and toxin extrusion), member 3 / Q86VL8* / Q3V050* / Q8K0H1* / Q96FL8* / SLC47A2* / SLC47A1* / solute carrier family 47 member 1* / solute carr...ENSDARG0000007456137


Protein motifs (from Interpro)
Interpro ID Name
 IPR002528  Multi antimicrobial extrusion protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006855 drug transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015238 drug transmembrane transporter activity IEA
 molecular_functionGO:0015297 antiporter activity IEA


Pathways (from Reactome)
Pathway description
Transport of bile salts and organic acids, metal ions and amine compounds


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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