ENSDARG00000052247


Danio rerio

Features
Gene ID: ENSDARG00000052247
  
Biological name :alkbh4
  
Synonyms : alkbh4 / alkB homolog 4, lysine demthylase
  
Possible biological names infered from orthology : alkB homolog 4, lysine demethylase / Mus musculus alkB homolog 4, lysine demethylase (Alkbh4), transcript variant 1, mRNA. / Q9D8F1 / Q9NXW9
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 61467618
Gene end: 61472766
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000068562
Ensembl peptide - ENSDARP00000156889
NCBI entrez gene - 553475     See in Manteia.
RefSeq - NM_001326370
RefSeq - NM_001326371
RefSeq Peptide - NP_001313299
RefSeq Peptide - NP_001313300
swissprot - F1QMZ8
ZFIN ID - ZDB-GENE-060526-275
Ensembl - ENSDARG00000052247
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ALKBH4ENSGALG00000001844Gallus gallus
 ALKBH4ENSG00000160993Homo sapiens
 Alkbh4ENSMUSG00000039754Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR027450  Alpha-ketoglutarate-dependent dioxygenase AlkB-like
 IPR032857  Alpha-ketoglutarate-dependent dioxygenase alkB homologue 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0070988 demethylation IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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