ENSDARG00000052331


Danio rerio

Features
Gene ID: ENSDARG00000052331
  
Biological name :abcf2b
  
Synonyms : abcf2b / ATP-binding cassette, sub-family F (GCN20), member 2b
  
Possible biological names infered from orthology : ABCF2 / ATP-binding cassette, sub-family F (GCN20), member 2 / ATP binding cassette subfamily F member 2 / Q99LE6 / Q9UG63
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 41403690
Gene end: 41420226
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000068644
NCBI entrez gene - 100000576     See in Manteia.
swissprot - E7F1S8
ZFIN ID - ZDB-GENE-050506-58
Ensembl - ENSDARG00000052331
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCF2ENSGALG00000034573Gallus gallus
 ABCF2ENSG00000033050Homo sapiens
 ABCF2ENSG00000285292Homo sapiens
 Abcf2ENSMUSG00000028953Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcf2a / ATP-binding cassette, sub-family F (GCN20), member 2a / ABCF2* / Q9UG63* / Q99LE6* / ATP binding cassette subfamily F member 2* / ATP-binding cassette, sub-family F (GCN20), member 2*ENSDARG0000003878591


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032781  ABC-transporter extension domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr