ENSDARG00000052818


Danio rerio

Features
Gene ID: ENSDARG00000052818
  
Biological name :smcr8a
  
Synonyms : E7FA21 / smcr8a / Smith-Magenis syndrome chromosome region, candidate 8a
  
Possible biological names infered from orthology : Guanine nucleotide exchange protein SMCR8 / Q3UMB5 / Q8TEV9 / SMCR8 / Smith-Magenis syndrome chromosome region, candidate 8
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 40255408
Gene end: 40258950
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000069232
NCBI entrez gene - 558696     See in Manteia.
swissprot - E7FA21
ZFIN ID - ZDB-GENE-071212-4
Ensembl - ENSDARG00000052818
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SMCR8ENSGALG00000024082Gallus gallus
 SMCR8ENSG00000176994Homo sapiens
 Smcr8ENSMUSG00000049323Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smcr8b / Smith-Magenis syndrome chromosome region, candidate 8b / SMCR8* / Q8TEV9* / Q3UMB5* / Guanine nucleotide exchange protein SMCR8 * / Smith-Magenis syndrome chromosome region, candidate 8*ENSDARG0000001580342


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr