ENSDARG00000053291


Danio rerio

Features
Gene ID: ENSDARG00000053291
  
Biological name :pnrc2
  
Synonyms : B7TWP7 / pnrc2 / proline-rich nuclear receptor coactivator 2
  
Possible biological names infered from orthology : Q9CR73 / Q9NPJ4
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 33101851
Gene end: 33105677
  
Corresponding Affymetrix probe sets: Dr.12439.6.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113947
Ensembl peptide - ENSDARP00000126420
NCBI entrez gene - 565522     See in Manteia.
RefSeq - NM_001130192
RefSeq Peptide - NP_001123664
swissprot - K7DY92
swissprot - B7TWP7
ZFIN ID - ZDB-GENE-030131-5475
Ensembl - ENSDARG00000053291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PNRC2ENSGALG00000004122Gallus gallus
 PNRC2ENSG00000189266Homo sapiens
 Pnrc2ENSMUSG00000028675Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pnrc1 / proline-rich nuclear receptor coactivator 1ENSDARG0000004390424


Protein motifs (from Interpro)
Interpro ID Name
 IPR026780  Proline-rich nuclear receptor coactivator 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ISS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0000932 P-body ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000155 somite somite increased amount , abnormal
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 ZFA:0000279 segmental plate segmental plate increased amount , abnormal
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 ZFA:0000396 nervous system nervous system increased amount , abnormal
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 ZFA:0001094 whole organism whole organism amount , ameliorated
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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