ENSDARG00000053558


Danio rerio

Features
Gene ID: ENSDARG00000053558
  
Biological name :rtkn2a
  
Synonyms : rhotekin 2a / rtkn2a
  
Possible biological names infered from orthology : Mus musculus rhotekin 2 (Rtkn2), transcript variant 1, mRNA. / Q14B46 / Q8IZC4 / rhotekin 2 / RTKN2
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 43610894
Gene end: 43623370
  
Corresponding Affymetrix probe sets: Dr.18135.1.A1_at (Zebrafish Array)   NM_001005937_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000070078
Ensembl peptide - ENSDARP00000112959
NCBI entrez gene - 449666     See in Manteia.
RefSeq - NM_001005937
RefSeq Peptide - NP_001005937
swissprot - F1QPS5
swissprot - E9QCU7
ZFIN ID - ZDB-GENE-041010-225
Ensembl - ENSDARG00000053558
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTKN2ENSGALG00000002980Gallus gallus
 RTKN2ENSG00000182010Homo sapiens
 Rtkn2ENSMUSG00000037846Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-40c11.1 / RTKN* / Q8C6B2* / Q9BST9* / rhotekin*ENSDARG0000003134535
rtkn2b / rhotekin 2b / RTKN* / Q8C6B2* / Q9BST9* / rhotekin*ENSDARG0000005290326


Protein motifs (from Interpro)
Interpro ID Name
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR012966  Anillin homology domain
 IPR030469  Rhotekin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030097 hemopoiesis IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr