ENSDARG00000031345


Danio rerio

Features
Gene ID: ENSDARG00000031345
  
Biological name :si:dkey-40c11.1
  
Synonyms : si:dkey-40c11.1
  
Possible biological names infered from orthology : Q8C6B2 / Q9BST9 / rhotekin / RTKN
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 43617262
Gene end: 43682930
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000069502
NCBI entrez gene - 564545     See in Manteia.
RefSeq - NM_001126415
RefSeq Peptide - NP_001119887
swissprot - A2BI20
ZFIN ID - ZDB-GENE-060531-142
Ensembl - ENSDARG00000031345
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTKNENSG00000114993Homo sapiens
 RtknENSMUSG00000034930Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rtkn2b / rhotekin 2b / RTKN* / Q8C6B2* / Q9BST9* / rhotekin*ENSDARG0000005290341
rtkn2a / rhotekin 2a / RTKN2* / Q14B46* / Q8IZC4* / rhotekin 2* / Mus musculus rhotekin 2 (Rtkn2), transcript variant 1, mRNA.*ENSDARG0000005355836


Protein motifs (from Interpro)
Interpro ID Name
 IPR001849  Pleckstrin homology domain
 IPR011072  HR1 rho-binding domain
 IPR011993  PH-like domain superfamily
 IPR012966  Anillin homology domain
 IPR030471  Rhotekin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007266 Rho protein signal transduction IEA
 biological_processGO:0032185 septin cytoskeleton organization IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0017049 GTP-Rho binding IEA


Pathways (from Reactome)
Pathway description
RHO GTPases Activate Rhotekin and Rhophilins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000094673 rhoab / Q6DHM9 / ras homolog gene family, member Ab / RHOA* / Q9QUI0* / P61586* / ras homolog family member A*  / complex
 ENSDARG00000059177 tax1bp3 / Tax1 (human T-cell leukemia virus type I) binding protein 3 / O14907* / Q9DBG9* / Tax1 binding protein 3*  / complex / reaction






 

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