ENSDARG00000059177


Danio rerio

Features
Gene ID: ENSDARG00000059177
  
Biological name :tax1bp3
  
Synonyms : tax1bp3 / Tax1 (human T-cell leukemia virus type I) binding protein 3
  
Possible biological names infered from orthology : O14907 / Q9DBG9 / Tax1 binding protein 3
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 6136220
Gene end: 6145158
  
Corresponding Affymetrix probe sets: Dr.4788.1.S1_at (Zebrafish Array)   NM_213470_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000076660
NCBI entrez gene - 406779     See in Manteia.
RefSeq - NM_213470
RefSeq Peptide - NP_998635
swissprot - Q8AWD4
ZFIN ID - ZDB-GENE-040426-2830
Ensembl - ENSDARG00000059177
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAX1BP3ENSGALG00000004618Gallus gallus
 O14907ENSG00000213977Homo sapiens
 Q9DBG9ENSMUSG00000040158Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR017268  Tax1-binding protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060028 convergent extension involved in axis elongation IMP


Pathways (from Reactome)
Pathway description
RHO GTPases Activate Rhotekin and Rhophilins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium increased size , abnormal
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 ZFA:0000060 prechordal plate prechordal plate malformed , abnormal
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 ZFA:0000132 neural plate neural plate malformed , abnormal
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 ZFA:0000135 notochord notochord malformed , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
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 ZFA:0001114 head head increased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000094673 rhoab / Q6DHM9 / ras homolog gene family, member Ab / RHOA* / Q9QUI0* / P61586* / ras homolog family member A*  / complex / reaction
 ENSDARG00000031345 si:dkey-40c11.1 / RTKN* / Q8C6B2* / Q9BST9* / rhotekin*  / complex / reaction






 

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contact: otassy@igbmc.fr