ENSDARG00000054213


Danio rerio

Features
Gene ID: ENSDARG00000054213
  
Biological name :hectd1
  
Synonyms : hectd1 / HECT domain containing 1
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase HECTD1 / HECT domain E3 ubiquitin protein ligase 1 / Q69ZR2 / Q9ULT8
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 28670132
Gene end: 28701283
  
Corresponding Affymetrix probe sets: Dr.10525.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126451
Ensembl peptide - ENSDARP00000139204
Ensembl peptide - ENSDARP00000070818
Ensembl peptide - ENSDARP00000145151
Ensembl peptide - ENSDARP00000126492
Ensembl peptide - ENSDARP00000133558
NCBI entrez gene - 100002034     See in Manteia.
RefSeq - NM_001002504
RefSeq - XM_009293112
RefSeq - XM_009293115
RefSeq Peptide - NP_001002504
swissprot - K7DYC2
swissprot - A0A0R4IGL6
swissprot - K7DYG3
swissprot - Q8JFV5
ZFIN ID - ZDB-GENE-030616-153
Ensembl - ENSDARG00000054213
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HECTD1ENSGALG00000009946Gallus gallus
 HECTD1ENSG00000092148Homo sapiens
 Hectd1ENSMUSG00000035247Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F1RCR6 / trip12 / thyroid hormone receptor interactor 12 / G5E870* / Q14669*ENSDARG0000006139713


Protein motifs (from Interpro)
Interpro ID Name
 IPR000569  HECT domain
 IPR002110  Ankyrin repeat
 IPR008979  Galactose-binding-like domain superfamily
 IPR010606  Mib-herc2
 IPR011989  Armadillo-like helical
 IPR012919  SUN domain
 IPR016024  Armadillo-type fold
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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