ENSDARG00000054319


Danio rerio

Features
Gene ID: ENSDARG00000054319
  
Biological name :oxct1b
  
Synonyms : 3-oxoacid CoA transferase 1b / oxct1b
  
Possible biological names infered from orthology : 3-oxoacid CoA-transferase 1 / 3-oxoacid CoA-transferase 2 / OXCT1 / OXCT2 / Oxct2a / Oxct2b / P55809 / Q9BYC2 / Q9D0K2 / Q9JJN4 / Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial / Succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 20771082
Gene end: 20785888
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000074184
NCBI entrez gene - 560273     See in Manteia.
RefSeq - NM_001077150
RefSeq Peptide - NP_001070618
swissprot - A8KBV1
ZFIN ID - ZDB-GENE-060929-212
Ensembl - ENSDARG00000054319
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OXCT1ENSGALG00000014846Gallus gallus
 OXCT1ENSG00000083720Homo sapiens
 OXCT2ENSG00000198754Homo sapiens
 Oxct1ENSMUSG00000022186Mus musculus
 Oxct2aENSMUSG00000076436Mus musculus
 Oxct2bENSMUSG00000076438Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
oxct1a / 3-oxoacid CoA transferase 1a / OXCT2* / OXCT1* / Q9D0K2* / Q9BYC2* / Q9JJN4* / Oxct2a* / Oxct2b* / P55809* / 3-oxoacid CoA-transferase 1* / 3-oxoacid CoA-transferase 2* / Succinyl-...ENSDARG0000001306378


Protein motifs (from Interpro)
Interpro ID Name
 IPR004163  Coenzyme A transferase binding site
 IPR004164  Coenzyme A transferase active site
 IPR004165  Coenzyme A transferase family I
 IPR012791  3-oxoacid CoA-transferase, subunit B
 IPR012792  3-oxoacid CoA-transferase, subunit A
 IPR014388  3-oxoacid CoA-transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0046952 ketone body catabolic process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0008260 3-oxoacid CoA-transferase activity IEA
 molecular_functionGO:0008410 CoA-transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Utilization of Ketone Bodies


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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