ENSDARG00000054606


Danio rerio

Features
Gene ID: ENSDARG00000054606
  
Biological name :mrpl1
  
Synonyms : mitochondrial ribosomal protein L1 / mrpl1
  
Possible biological names infered from orthology : 39S ribosomal protein L1, mitochondrial / Q99N96 / Q9BYD6
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 38825225
Gene end: 38834564
  
Corresponding Affymetrix probe sets: Dr.16031.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071305
NCBI entrez gene - 553284     See in Manteia.
RefSeq - NM_001204133
RefSeq Peptide - NP_001191062
swissprot - F1QMG1
ZFIN ID - ZDB-GENE-060526-311
Ensembl - ENSDARG00000054606
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MRPL1ENSGALG00000010324Gallus gallus
 MRPL1ENSG00000169288Homo sapiens
 Mrpl1ENSMUSG00000029486Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR016095  Ribosomal protein L1, 3-layer alpha/beta-sandwich
 IPR023674  Ribosomal protein L1-like
 IPR028364  Ribosomal protein L1/ribosomal biogenesis protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000469 cleavage involved in rRNA processing IBA
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0006412 translation IBA
 biological_processGO:0031118 rRNA pseudouridine synthesis IBA
 biological_processGO:0031120 snRNA pseudouridine synthesis IBA
 cellular_componentGO:0031429 box H/ACA snoRNP complex IBA
 molecular_functionGO:0034513 box H/ACA snoRNA binding IBA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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