ENSMUSG00000029486


Mus musculus

Features
Gene ID: ENSMUSG00000029486
  
Biological name :Mrpl1
  
Synonyms : 39S ribosomal protein L1, mitochondrial / Mrpl1 / Q99N96
  
Possible biological names infered from orthology : mitochondrial ribosomal protein L1 / Q9BYD6
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: E3
Gene start: 96209493
Gene end: 96266727
  
Corresponding Affymetrix probe sets: 10523365 (MoGene1.0st)   1423351_at (Mouse Genome 430 2.0 Array)   1450948_a_at (Mouse Genome 430 2.0 Array)   1460508_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000037046
Ensembl peptide - ENSMUSP00000112451
Ensembl peptide - ENSMUSP00000112977
NCBI entrez gene - 94061     See in Manteia.
MGI - MGI:2137202
RefSeq - XM_011249596
RefSeq - NM_001039084
RefSeq - NM_053158
RefSeq - XM_006535292
RefSeq Peptide - NP_001034173
RefSeq Peptide - NP_444388
swissprot - Q99N96
swissprot - Q9D3F3
Ensembl - ENSMUSG00000029486
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mrpl1ENSDARG00000054606Danio rerio
 MRPL1ENSGALG00000010324Gallus gallus
 MRPL1ENSG00000169288Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005879  Ribosomal protein L1, mitochondrial
 IPR023674  Ribosomal protein L1-like
 IPR028364  Ribosomal protein L1/ribosomal biogenesis protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000469 cleavage involved in rRNA processing IBA
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0006412 translation ISO
 biological_processGO:0031118 rRNA pseudouridine synthesis IBA
 biological_processGO:0031120 snRNA pseudouridine synthesis IBA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005762 mitochondrial large ribosomal subunit ISO
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0031429 box H/ACA snoRNP complex IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome ISO
 molecular_functionGO:0034513 box H/ACA snoRNA binding IBA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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