ENSDARG00000054778


Danio rerio

Features
Gene ID: ENSDARG00000054778
  
Biological name :pogza
  
Synonyms : pogo transposable element derived with ZNF domain a / pogza
  
Possible biological names infered from orthology : pogo transposable element derived with ZNF domain / pogo transposable element with ZNF domain / POGZ / Q7Z3K3 / Q8BZH4
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 42432625
Gene end: 42456001
  
Corresponding Affymetrix probe sets: Dr.12663.1.A1_at (Zebrafish Array)   Dr.7577.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071406
NCBI entrez gene - 100535215     See in Manteia.
RefSeq - NM_001214910
RefSeq Peptide - NP_001201839
swissprot - A8E7N7
ZFIN ID - ZDB-GENE-040914-76
Ensembl - ENSDARG00000054778
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POGZENSGALG00000036365Gallus gallus
 POGZENSG00000143442Homo sapiens
 PogzENSMUSG00000038902Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pogzb / pogo transposable element derived with ZNF domain b / POGZ* / Q7Z3K3* / Q8BZH4* / pogo transposable element with ZNF domain* / pogo transposable element derived with ZNF domain*ENSDARG0000007654230
znf280d / zinc finger protein 280D / Q68FE8* / Q6N043* / Q6P3Y5* / Q86YH2* / Q8ND82* / P59817* / Zfp280c* / Zfp280b* / Zfp280d* / ZNF280A* / ZNF280B* / ZNF280C* / AC090517.4* / zinc finger ...ENSDARG0000007701317


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007417 central nervous system development IMP
 biological_processGO:0008345 larval locomotory behavior IMP
 biological_processGO:0021510 spinal cord development IMP
 biological_processGO:0071599 otic vesicle development IMP
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain decreased size , abnormal
brain edematous , abnormal
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 ZFA:0000012 central nervous system central nervous system decreased thickness , abnormal
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 ZFA:0000051 otic vesicle otic vesicle decreased size , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000075 spinal cord spinal cord decreased size , abnormal
spinal cord decreased thickness , abnormal
Show

 ZFA:0000084 yolk yolk edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk necrotic , abnormal
trunk curved ventral , abnormal
Show

 ZFA:0009091 melanocyte melanocyte decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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