ENSG00000143442


Homo sapiens

Features
Gene ID: ENSG00000143442
  
Biological name :POGZ
  
Synonyms : pogo transposable element derived with ZNF domain / POGZ / Q7Z3K3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 151402724
Gene end: 151459465
  
Corresponding Affymetrix probe sets: 212153_at (Human Genome U133 Plus 2.0 Array)   215281_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431259
Ensembl peptide - ENSP00000418408
Ensembl peptide - ENSP00000432295
Ensembl peptide - ENSP00000472860
Ensembl peptide - ENSP00000433934
Ensembl peptide - ENSP00000433637
Ensembl peptide - ENSP00000271715
Ensembl peptide - ENSP00000357856
Ensembl peptide - ENSP00000376484
Ensembl peptide - ENSP00000386836
Ensembl peptide - ENSP00000390156
Ensembl peptide - ENSP00000395332
Ensembl peptide - ENSP00000403955
NCBI entrez gene - 23126     See in Manteia.
OMIM - 614787
RefSeq - XM_017000749
RefSeq - NM_145796
RefSeq - NM_207171
RefSeq - XM_005244999
RefSeq - XM_005245000
RefSeq - XM_005245001
RefSeq - XM_005245005
RefSeq - XM_005245006
RefSeq - XM_011509331
RefSeq - XM_017000744
RefSeq - XM_017000745
RefSeq - XM_017000746
RefSeq - XM_017000747
RefSeq - XM_017000748
RefSeq - NM_001194937
RefSeq - NM_001194938
RefSeq - NM_015100
RefSeq Peptide - NP_001181867
RefSeq Peptide - NP_055915
RefSeq Peptide - NP_665739
RefSeq Peptide - NP_997054
RefSeq Peptide - NP_001181866
swissprot - M0R2X2
swissprot - Q7Z3K3
swissprot - A0A0G2JHK5
swissprot - E9PJY9
swissprot - E9PIR8
swissprot - A6PW30
swissprot - H0YCT3
swissprot - H7C238
Ensembl - ENSG00000143442
  
Related genetic diseases (OMIM): 616364 - White-Sutton syndrome, 616364

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pogzaENSDARG00000054778Danio rerio
 pogzbENSDARG00000076542Danio rerio
 POGZENSGALG00000036365Gallus gallus
 PogzENSMUSG00000038902Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6N043 / ZNF280D / zinc finger protein 280DENSG0000013787123
AC090517.4ENSG0000028525320
Q8ND82 / ZNF280C / zinc finger protein 280CENSG0000005627719
Q86YH2 / ZNF280B / zinc finger protein 280BENSG0000027500413
P59817 / ZNF280A / zinc finger protein 280AENSG0000016954812


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR009057  Homeobox-like domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007064 mitotic sister chromatid cohesion IMP
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051382 kinetochore assembly IMP
 cellular_componentGO:0000790 nuclear chromatin IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000194 Open mouth 
Show

 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
Show

 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000297 Facial hypotonia 
Show

 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
Show

 HP:0000307 Pointed chin 
Show

 HP:0000322 Short philtrum 
Show

 HP:0000356 Abnormality of the outer ear "An abnormality of the outer ear, which is also known as `pinna` (FMA:56580 ) or auricle." [HPO:probinson]
Show

 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
Show

 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
Show

 HP:0000455 Broad nasal tip 
Show

 HP:0000470 Short neck 
Show

 HP:0000483 Astigmatism 
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
Show

 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
Show

 HP:0000540 Hypermetropia 
Show

 HP:0000545 Myopia 
Show

 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000649 Abnormality of vision evoked potentials 
Show

 HP:0000708 Behavioural/Psychiatric Abnormality 
Show

 HP:0001156 Brachydactyly 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001388 Joint laxity 
Show

 HP:0002019 Constipation 
Show

 HP:0002020 Gastroesophageal reflux 
Show

 HP:0002059 Cerebral atrophy 
Show

 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0002173 Seizures, hypoglycemic 
Show

 HP:0002714 Downturned corners of mouth "A morphological `abnormality of the mouth` (HP:0000153) in which the `angle of the mouth` (FMA:77269) is downturned." [HPO:probinson]
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0005280 Depressed nasal root and bridge 
Show

 HP:0008619 Hearing loss, sensorineural, bilateral 
Show

 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
Show

 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
Show

 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
Show

 HP:0100704 Cortical visual impairment "A form of loss of vision caused by damage to the visual cortex rather than a defect in the eye." [HPO:probinson]
Show

 HP:0100716 Autoagression "Aggression towards oneself." [HPO:sdoelken]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr