ENSG00000275004


Homo sapiens

Features
Gene ID: ENSG00000275004
  
Biological name :ZNF280B
  
Synonyms : Q86YH2 / zinc finger protein 280B / ZNF280B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q11.22
Gene start: 22484421
Gene end: 22509154
  
Corresponding Affymetrix probe sets: 215048_at (Human Genome U133 Plus 2.0 Array)   229360_at (Human Genome U133 Plus 2.0 Array)   230789_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000485750
Ensembl peptide - ENSP00000480958
Ensembl peptide - ENSP00000481008
NCBI entrez gene - 140883     See in Manteia.
RefSeq - XM_011529897
RefSeq - NM_080764
RefSeq - XM_011529893
RefSeq - XM_011529895
RefSeq - XM_011529896
RefSeq Peptide - NP_542942
swissprot - Q86YH2
swissprot - A0A0D9SEJ8
Ensembl - ENSG00000275004
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf280dENSDARG00000077013Danio rerio
 ENSGALG00000037723Gallus gallus
 Zfp280bENSMUSG00000049764Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P59817 / ZNF280A / zinc finger protein 280AENSG0000016954864
AC090517.4ENSG0000028525354
Q6N043 / ZNF280D / zinc finger protein 280DENSG0000013787154
Q8ND82 / ZNF280C / zinc finger protein 280CENSG0000005627747
POGZ / Q7Z3K3 / pogo transposable element derived with ZNF domainENSG0000014344235


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR025243  Domain of unknown function DUF4195
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr