ENSG00000137871


Homo sapiens

Features
Gene ID: ENSG00000137871
  
Biological name :ZNF280D
  
Synonyms : Q6N043 / zinc finger protein 280D / ZNF280D
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q21.3
Gene start: 56630181
Gene end: 56734086
  
Corresponding Affymetrix probe sets: 1568951_at (Human Genome U133 Plus 2.0 Array)   221213_s_at (Human Genome U133 Plus 2.0 Array)   239107_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000454173
Ensembl peptide - ENSP00000267807
Ensembl peptide - ENSP00000453124
Ensembl peptide - ENSP00000453636
Ensembl peptide - ENSP00000453706
Ensembl peptide - ENSP00000453912
Ensembl peptide - ENSP00000454111
NCBI entrez gene - 54816     See in Manteia.
RefSeq - XM_017022345
RefSeq - XM_005254485
RefSeq - XM_011521701
RefSeq - XM_011521702
RefSeq - XM_011521704
RefSeq - XM_011521708
RefSeq - XM_011521709
RefSeq - XM_011521710
RefSeq - XM_017022344
RefSeq - NM_001002843
RefSeq - NM_001002844
RefSeq - NM_001288588
RefSeq - NM_001288589
RefSeq - NM_017661
RefSeq Peptide - NP_001275518
RefSeq Peptide - NP_001002843
RefSeq Peptide - NP_001002844
RefSeq Peptide - NP_060131
RefSeq Peptide - NP_001275517
swissprot - Q6N043
swissprot - H0YN90
swissprot - H0YLA6
Ensembl - ENSG00000137871
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf280dENSDARG00000077013Danio rerio
 ENSGALG00000037723Gallus gallus
 Q68FE8ENSMUSG00000038535Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC090517.4ENSG0000028525374
Q8ND82 / ZNF280C / zinc finger protein 280CENSG0000005627751
POGZ / Q7Z3K3 / pogo transposable element derived with ZNF domainENSG0000014344233
Q86YH2 / ZNF280B / zinc finger protein 280BENSG0000027500430
P59817 / ZNF280A / zinc finger protein 280AENSG0000016954827


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR025243  Domain of unknown function DUF4195
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr