ENSMUSG00000038535


Mus musculus

Features
Gene ID: ENSMUSG00000038535
  
Biological name :Zfp280d
  
Synonyms : Q68FE8 / Zfp280d / zinc finger protein 280D
  
Possible biological names infered from orthology : AC090517.4 / Q6N043 / ZNF280D
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: D
Gene start: 72274860
Gene end: 72363777
  
Corresponding Affymetrix probe sets: 10586880 (MoGene1.0st)   1426556_at (Mouse Genome 430 2.0 Array)   1457455_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000096175
Ensembl peptide - ENSMUSP00000138817
Ensembl peptide - ENSMUSP00000139209
Ensembl peptide - ENSMUSP00000139250
Ensembl peptide - ENSMUSP00000138848
Ensembl peptide - ENSMUSP00000138857
Ensembl peptide - ENSMUSP00000138902
Ensembl peptide - ENSMUSP00000138970
Ensembl peptide - ENSMUSP00000138994
Ensembl peptide - ENSMUSP00000139052
Ensembl peptide - ENSMUSP00000139091
Ensembl peptide - ENSMUSP00000139127
NCBI entrez gene - 235469     See in Manteia.
MGI - MGI:2384583
RefSeq - XM_017313343
RefSeq - NM_001311105
RefSeq - NM_146224
RefSeq - XM_006511118
RefSeq - XM_006511120
RefSeq - XM_006511121
RefSeq - XM_006511122
RefSeq - XM_006511123
RefSeq - XM_006511125
RefSeq - XM_017313342
RefSeq Peptide - NP_001298034
RefSeq Peptide - NP_666336
swissprot - V9GXC9
swissprot - V9GXF6
swissprot - V9GXP2
swissprot - Q68FE8
swissprot - Q8R2V6
swissprot - V9GWT3
swissprot - V9GWV5
swissprot - V9GWW1
swissprot - V9GX57
swissprot - V9GWZ2
swissprot - V9GX97
Ensembl - ENSMUSG00000038535
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf280dENSDARG00000077013Danio rerio
 ENSGALG00000037723Gallus gallus
 AC090517.4ENSG00000285253Homo sapiens
 Q6N043ENSG00000137871Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6P3Y5 / Zfp280c / zinc finger protein 280C / Q8ND82* / ZNF280C*ENSMUSG0000003691645
Pogz / Q8BZH4 / pogo transposable element with ZNF domain / Q7Z3K3* / pogo transposable element derived with ZNF domain*ENSMUSG0000003890233
Zfp280b / zinc finger protein 280B / Q86YH2* / ZNF280B*ENSMUSG0000004976425


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR025243  Domain of unknown function DUF4195
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr