ENSDARG00000055108


Danio rerio

Features
Gene ID: ENSDARG00000055108
  
Biological name :gde1
  
Synonyms : gde1 / glycerophosphodiester phosphodiesterase 1
  
Possible biological names infered from orthology : Q9JL56 / Q9NZC3
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 26839241
Gene end: 26852516
  
Corresponding Affymetrix probe sets: Dr.4501.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000009194
swissprot - Q6P0H8
ZFIN ID - ZDB-GENE-040426-881
Ensembl - ENSDARG00000055108
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GDE1ENSGALG00000006916Gallus gallus
 GDE1ENSG00000006007Homo sapiens
 Gde1ENSMUSG00000033917Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004129  Glycerophosphoryl diester phosphodiesterase
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008889 glycerophosphodiester phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
Glycerophospholipid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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