ENSMUSG00000033917


Mus musculus

Features
Gene ID: ENSMUSG00000033917
  
Biological name :Gde1
  
Synonyms : Gde1 / Glycerophosphodiester phosphodiesterase 1 / Q9JL56
  
Possible biological names infered from orthology : Q9NZC3
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F2
Gene start: 118688545
Gene end: 118705778
  
Corresponding Affymetrix probe sets: 10567335 (MoGene1.0st)   1418444_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000046371
Ensembl peptide - ENSMUSP00000147251
Ensembl peptide - ENSMUSP00000147236
Ensembl peptide - ENSMUSP00000122015
NCBI entrez gene - 56209     See in Manteia.
MGI - MGI:1891827
RefSeq - NM_019580
RefSeq Peptide - NP_062526
swissprot - A0A140LJK8
swissprot - A0A140LJJ4
swissprot - D3Z3E2
swissprot - Q9JL56
Ensembl - ENSMUSG00000033917
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gde1ENSDARG00000055108Danio rerio
 GDE1ENSGALG00000006916Gallus gallus
 GDE1ENSG00000006007Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004129  Glycerophosphoryl diester phosphodiesterase
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006644 phospholipid metabolic process IDA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway ISO
 biological_processGO:0070291 N-acylethanolamine metabolic process IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0004622 lysophospholipase activity IDA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008889 glycerophosphodiester phosphodiesterase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0047395 glycerophosphoinositol glycerophosphodiesterase activity IDA


Pathways (from Reactome)
Pathway description
Glycerophospholipid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005584 abnormal enzyme/coenzyme activity "altered ability of any of these proteins, or their cofactors, to act as catalysts to induce chemical changes in other substances" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Gt(ROSA)26Sortm1.1(CAG-cas9*,-EGFP)Fezh/Gt(ROSA)26Sortm1.1(CAG-cas9*,-EGFP)Fezh
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * FVB/N

Allelic Composition: Gde1tm1Crv/Gde1tm1Crv,Napepldtm1Crv/Napepldtm1Crv
Genetic Background: involves: 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr