ENSDARG00000055271


Danio rerio

Features
Gene ID: ENSDARG00000055271
  
Biological name :nkd2a
  
Synonyms : naked cuticle homolog 2a / nkd2a
  
Possible biological names infered from orthology : Mus musculus naked cuticle 2 (Nkd2), transcript variant 2, mRNA. / naked cuticle homolog 2 / NKD2 / Q8VE28 / Q969F2
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 52999778
Gene end: 53054838
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000018883
NCBI entrez gene - 100049175     See in Manteia.
RefSeq - NM_001098197
RefSeq Peptide - NP_001091667
swissprot - F1QI44
ZFIN ID - ZDB-GENE-071130-1
Ensembl - ENSDARG00000055271
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NKD2ENSG00000145506Homo sapiens
 Nkd2ENSMUSG00000021567Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nkd3 / naked cuticle homolog 3 / NKD2* / Q8VE28* / Q969F2* / naked cuticle homolog 2* / Mus musculus naked cuticle 2 (Nkd2), transcript variant 2, mRNA.*ENSDARG0000001317439
nkd1 / Q2TJA6 / naked cuticle homolog 1 (Drosophila) / Q99MH6* / Q969G9* / naked cuticle homolog 1* / Protein naked cuticle homolog 1 *ENSDARG0000002005338


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle decreased size , abnormal
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 ZFA:0001125 organizer inducing center organizer inducing center increased width , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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