ENSDARG00000055439


Danio rerio

Features
Gene ID: ENSDARG00000055439
  
Biological name :adamtsl7
  
Synonyms : adamtsl7 / ADAMTS-like 7
  
Possible biological names infered from orthology : Q3UTY6 / Q6ZMP0 / thrombospondin type 1 domain containing 4 / Thrombospondin type-1 domain-containing protein 4 / THSD4
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 21576674
Gene end: 21599219
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114703
NCBI entrez gene - 556634     See in Manteia.
RefSeq - XM_017356043
RefSeq - XM_021476316
swissprot - F1QFQ3
ZFIN ID - ZDB-GENE-070816-2
Ensembl - ENSDARG00000055439
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000008164Gallus gallus
 THSD4ENSG00000187720Homo sapiens
 Thsd4ENSMUSG00000032289Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ADAMTSL4 / ADAMTS like 4 / Q6UY14*ENSDARG0000006340739
si:ch211-267e7.3ENSDARG0000007548730
adamtsl2 / ADAMTS-like 2 / Q7TSK7* / Q86TH1* / ADAMTS-like protein 2 *ENSDARG0000007403326
adamtsl3 / ADAMTS-like 3 / P82987*ENSDARG0000002790322
paplna / papilin a, proteoglycan-like sulfated glycoprotein / PAPLN* / Q9EPX2* / O95428* / Papilin * / papilin, proteoglycan like sulfated glycoprotein*ENSDARG0000002786722
adamts13 / ADAM metallopeptidase with thrombospondin type 1 motif, 13 / Q769J6* / Q76LX8* / A disintegrin and metalloproteinase with thrombospondin motifs 13 *ENSDARG0000007627020
adamts9 / ADAM metallopeptidase with thrombospondin type 1 motif, 9 / Q9P2N4* / a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9*ENSDARG0000007777817
adamts15b / ADAM metallopeptidase with thrombospondin type 1 motif, 15b / P59384* / Q8TE58* / ADAMTS15* / ADAM metallopeptidase with thrombospondin type 1 motif 15* / A disintegrin and meta...ENSDARG0000003354411
adamts15a / ADAM metallopeptidase with thrombospondin type 1 motif, 15a / P59384* / Q8TE58* / ADAMTS15* / ADAM metallopeptidase with thrombospondin type 1 motif 15* / A disintegrin and meta...ENSDARG0000002912411
adamts15b / ADAM metallopeptidase with thrombospondin type 1 motif, 15b / Q9UP79* / ADAMTS8* / ADAM metallopeptidase with thrombospondin type 1 motif 8* / A disintegrin and metalloproteinas...ENSDARG0000005825211
adamts1 / ADAM metallopeptidase with thrombospondin type 1 motif, 1 / Q9UHI8*ENSDARG0000010351911
paplnb / papilin b, proteoglycan-like sulfated glycoprotein / PAPLN* / Q9EPX2* / O95428* / Papilin * / papilin, proteoglycan like sulfated glycoprotein*ENSDARG0000004218611
adamts8a / ADAM metallopeptidase with thrombospondin type 1 motif, 8a / Q9UP79* / ADAMTS8* / ADAM metallopeptidase with thrombospondin type 1 motif 8* / A disintegrin and metalloproteinase ...ENSDARG0000000770910
adamts5 / ADAM metallopeptidase with thrombospondin type 1 motif 5 / Q9UNA0*ENSDARG000001003079


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR010294  ADAM-TS Spacer 1
 IPR010909  PLAC


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 molecular_functionGO:0008233 peptidase activity IEA


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr