ENSDARG00000055481


Danio rerio

Features
Gene ID: ENSDARG00000055481
  
Biological name :atf7b
  
Synonyms : activating transcription factor 7b / atf7b
  
Possible biological names infered from orthology : AC023509.3 / activating transcription factor 7 / ATF7 / Cyclic AMP-dependent transcription factor ATF-7 / Gm28047 / P17544 / Q8R0S1
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 39613357
Gene end: 39631181
  
Corresponding Affymetrix probe sets: Dr.1216.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094817
Ensembl peptide - ENSDARP00000120632
NCBI entrez gene - 567018     See in Manteia.
swissprot - B3DIW4
swissprot - F1Q647
ZFIN ID - ZDB-GENE-030131-3028
Ensembl - ENSDARG00000055481
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000039134Gallus gallus
 AC023509.3ENSG00000267281Homo sapiens
 ATF7ENSG00000170653Homo sapiens
 Atf7ENSMUSG00000099083Mus musculus
 Gm28047ENSMUSG00000052414Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atf7a / activating transcription factor 7a / ATF7* / P17544* / Q8R0S1* / Gm28047* / AC023509.3* / activating transcription factor 7* / Cyclic AMP-dependent transcription factor ATF-7 *ENSDARG0000001129865
atf2 / activating transcription factor 2 / P15336* / P16951* / Cyclic AMP-dependent transcription factor ATF-2 *ENSDARG0000002390346
creb5b / cAMP responsive element binding protein 5b / CREB5* / Q02930* / cAMP responsive element binding protein 5*ENSDARG0000007053636
creb5a / cAMP responsive element binding protein 5aENSDARG0000009900227


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain
 IPR013087  Zinc finger C2H2-type
 IPR016378  Transcription factor cyclic AMP-dependent, CRE-BP1-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr