ENSDARG00000055679


Danio rerio

Features
Gene ID: ENSDARG00000055679
  
Biological name :mto1
  
Synonyms : mitochondrial tRNA translation optimization 1 / mto1
  
Possible biological names infered from orthology : Q9Y2Z2
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 14214755
Gene end: 14309962
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000072515
NCBI entrez gene - 100009640     See in Manteia.
RefSeq - NM_001083009
RefSeq - XM_009306472
RefSeq Peptide - NP_001076478
swissprot - F1R509
ZFIN ID - ZDB-GENE-070209-253
Ensembl - ENSDARG00000055679
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MTO1ENSGALG00000015923Gallus gallus
 MTO1ENSG00000135297Homo sapiens
 Mto1ENSMUSG00000032342Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002218  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related
 IPR004416  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
 IPR020595  MnmG-related, conserved site
 IPR023753  FAD/NAD(P)-binding domain
 IPR026904  GidA associated domain 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IBA
 biological_processGO:0070899 mitochondrial tRNA wobble uridine modification IBA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr