ENSDARG00000056468


Danio rerio

Features
Gene ID: ENSDARG00000056468
  
Biological name :asb16
  
Synonyms : ankyrin repeat and SOCS box containing 16 / asb16
  
Possible biological names infered from orthology : Ankyrin repeat and SOCS box protein 16 / Q8VHS5 / Q96NS5
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 20001608
Gene end: 20011807
  
Corresponding Affymetrix probe sets: Dr.11970.1.S1_at (Zebrafish Array)   NM_001040368_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120787
NCBI entrez gene - 678621     See in Manteia.
RefSeq - NM_001040368
RefSeq Peptide - NP_001035458
swissprot - F1QB63
ZFIN ID - ZDB-GENE-031031-3
Ensembl - ENSDARG00000056468
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ASB16ENSG00000161664Homo sapiens
 Asb16ENSMUSG00000034768Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
asb10 / ankyrin repeat and SOCS box containing 10 / Q8WXI3* / Q91ZT7* / Ankyrin repeat and SOCS box protein 10 *ENSDARG0000009946133
asb4 / ankyrin repeat and SOCS box containing 4 / Q9WV71* / Q9Y574* / Mus musculus ankyrin repeat and SOCS box-containing 4 (Asb4), transcript variant 2, mRNA.*ENSDARG0000003498827
asb18 / ankyrin repeat and SOCS box containing 18 / Q6ZVZ8* / Q8VHA6* / Ankyrin repeat and SOCS box protein 18 *ENSDARG0000011457223


Protein motifs (from Interpro)
Interpro ID Name
 IPR001496  SOCS box domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IBA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IBA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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