ENSDARG00000034988


Danio rerio

Features
Gene ID: ENSDARG00000034988
  
Biological name :asb4
  
Synonyms : ankyrin repeat and SOCS box containing 4 / asb4
  
Possible biological names infered from orthology : Mus musculus ankyrin repeat and SOCS box-containing 4 (Asb4), transcript variant 2, mRNA. / Q9WV71 / Q9Y574
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 41169996
Gene end: 41182251
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000048437
Ensembl peptide - ENSDARP00000113942
NCBI entrez gene - 550321     See in Manteia.
RefSeq - NM_001017628
RefSeq Peptide - NP_001017628
swissprot - F1QCR9
swissprot - Q1LX06
ZFIN ID - ZDB-GENE-050417-100
Ensembl - ENSDARG00000034988
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000009691Gallus gallus
 ASB4ENSG00000005981Homo sapiens
 Asb4ENSMUSG00000042607Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
asb10 / ankyrin repeat and SOCS box containing 10 / Q8WXI3* / Q91ZT7* / Ankyrin repeat and SOCS box protein 10 *ENSDARG0000009946134
asb16 / ankyrin repeat and SOCS box containing 16 / Q8VHS5* / Q96NS5* / Ankyrin repeat and SOCS box protein 16 *ENSDARG0000005646829
asb18 / ankyrin repeat and SOCS box containing 18 / Q6ZVZ8* / Q8VHA6* / Ankyrin repeat and SOCS box protein 18 *ENSDARG0000011457225


Protein motifs (from Interpro)
Interpro ID Name
 IPR001496  SOCS box domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IBA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IBA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr