ENSDARG00000056475


Danio rerio

Features
Gene ID: ENSDARG00000056475
  
Biological name :trnau1apb
  
Synonyms : tRNA selenocysteine 1 associated protein 1b / trnau1apb
  
Possible biological names infered from orthology : C6orf52 / chromosome 6 open reading frame 52 / Q5T4I8
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 24310635
Gene end: 24317436
  
Corresponding Affymetrix probe sets: Dr.5347.1.S1_a_at (Zebrafish Array)   Dr.5347.2.S1_at (Zebrafish Array)   NM_001029966_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073432
NCBI entrez gene - 791478     See in Manteia.
RefSeq - NM_001029966
RefSeq Peptide - NP_001025137
swissprot - F1QXG2
ZFIN ID - ZDB-GENE-040426-2386
Ensembl - ENSDARG00000056475
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C2H6orf52ENSGALG00000012721Gallus gallus
 Q5T4I8ENSG00000137434Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q503H1 / trnau1apa / tRNA selenocysteine 1 associated protein 1a / Q9NX07* / Q80VC6* / TRNAU1AP* / tRNA selenocysteine 1 associated protein 1*ENSDARG0000010132338


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034510  SECp43, RNA recognition motif 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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