ENSDARG00000101323


Danio rerio

Features
Gene ID: ENSDARG00000101323
  
Biological name :trnau1apa
  
Synonyms : Q503H1 / tRNA selenocysteine 1 associated protein 1a / trnau1apa
  
Possible biological names infered from orthology : Q80VC6 / Q9NX07 / tRNA selenocysteine 1 associated protein 1 / TRNAU1AP
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 13923600
Gene end: 13933204
  
Corresponding Affymetrix probe sets: Dr.14411.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000141333
NCBI entrez gene - 553636     See in Manteia.
swissprot - B2GPG6
swissprot - Q503H1
ZFIN ID - ZDB-GENE-050522-502
Ensembl - ENSDARG00000101323
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000001310Gallus gallus
 Q9NX07ENSG00000180098Homo sapiens
 Q80VC6ENSMUSG00000028898Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trnau1apb / tRNA selenocysteine 1 associated protein 1b / Q5T4I8* / C6orf52* / chromosome 6 open reading frame 52*ENSDARG0000005647538


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034510  SECp43, RNA recognition motif 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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