ENSDARG00000056481


Danio rerio

Features
Gene ID: ENSDARG00000056481
  
Biological name :vat1
  
Synonyms : Q8JFV8 / vat1 / vesicle amine transport 1
  
Possible biological names infered from orthology : Q62465 / Q99536
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 19914332
Gene end: 19971774
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073439
NCBI entrez gene - 368752     See in Manteia.
RefSeq - NM_001007051
RefSeq Peptide - NP_001007052
swissprot - Q8JFV8
ZFIN ID - ZDB-GENE-030616-178
Ensembl - ENSDARG00000056481
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VAT1ENSGALG00000002818Gallus gallus
 VAT1ENSG00000108828Homo sapiens
 Vat1ENSMUSG00000034993Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vat1l / vesicle amine transport 1-like / Q80TB8* / Q9HCJ6* / vesicle amine transport protein 1 like*ENSDARG0000010128036
cryz / crystallin, zeta (quinone reductase) / P47199* / Q08257* / crystallin zeta* / Quinone oxidoreductase *ENSDARG0000001607421
CR628323.3 / Q53FA7* / TP53I3* / tumor protein p53 inducible protein 3*ENSDARG0000010615821
mecr / Q6GQN8 / mitochondrial trans-2-enoyl-CoA reductase / Q9BV79* / Q9DCS3* / Enoyl-[acyl-carrier-protein] reductase, mitochondrial *ENSDARG0000003232617
CABZ01088134.1ENSDARG0000003358715


Protein motifs (from Interpro)
Interpro ID Name
 IPR002364  Quinone oxidoreductase/zeta-crystallin, conserved site
 IPR011032  GroES-like superfamily
 IPR013154  Alcohol dehydrogenase, N-terminal
 IPR016040  NAD(P)-binding domain
 IPR020843  Polyketide synthase, enoylreductase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0048037 cofactor binding ISS


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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