ENSDARG00000056559


Danio rerio

Features
Gene ID: ENSDARG00000056559
  
Biological name :ccz1
  
Synonyms : ccz1 / CCZ1 homolog, vacuolar protein trafficking and biogenesis associated
  
Possible biological names infered from orthology : CCZ1B / CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated / P86790 / P86791 / Q8C1Y8 / Vacuolar fusion
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 17657224
Gene end: 17686404
  
Corresponding Affymetrix probe sets: Dr.5154.1.A1_at (Zebrafish Array)   NM_200134_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073520
NCBI entrez gene - 393103     See in Manteia.
RefSeq - NM_200134
RefSeq - XM_017358438
RefSeq Peptide - NP_956428
swissprot - F1QVT9
ZFIN ID - ZDB-GENE-040426-698
Ensembl - ENSDARG00000056559
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCZ1ENSGALG00000003458Gallus gallus
 CCZ1ENSG00000122674Homo sapiens
 CCZ1BENSG00000146574Homo sapiens
 Ccz1ENSMUSG00000029617Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013176  Protein of unknown function DUF1712, fungi


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000078585 mon1a / MON1 secretory trafficking family member A / Q86VX9* / MON1 homolog A, secretory trafficking associated*  / complex
 ENSDARG00000020497 rab7 / RAB7, member RAS oncogene family / RAB7A* / P51150* / P51149* / RAB7A, member RAS oncogene family*  / reaction
 ENSDARG00000056122 gdi1 / GDP dissociation inhibitor 1 / P31150* / P50396* / Rab GDP dissociation inhibitor alpha *  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr