ENSDARG00000057322


Danio rerio

Features
Gene ID: ENSDARG00000057322
  
Biological name :tmem47
  
Synonyms : Q6PFT6 / tmem47 / transmembrane protein 47
  
Possible biological names infered from orthology : Q9BQJ4 / Q9JJG6
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 18565904
Gene end: 18582922
  
Corresponding Affymetrix probe sets: Dr.3089.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000104833
NCBI entrez gene - 406640     See in Manteia.
RefSeq - NM_214763
RefSeq Peptide - NP_999928
swissprot - Q1LY05
swissprot - Q6PFT6
ZFIN ID - ZDB-GENE-040426-2644
Ensembl - ENSDARG00000057322
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM47ENSGALG00000027198Gallus gallus
 Q9BQJ4ENSG00000147027Homo sapiens
 Q9JJG6ENSMUSG00000025666Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
perp / PERP, TP53 apoptosis effector / Q96FX8* / Q9JK95* / p53 apoptosis effector related to PMP-22 *ENSDARG0000006357228


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR015664  P53-induced protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005912 adherens junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr