ENSDARG00000057743


Danio rerio

Features
Gene ID: ENSDARG00000057743
  
Biological name :si:dkey-10f21.4
  
Synonyms : si:dkey-10f21.4
  
Possible biological names infered from orthology : Mus musculus transmembrane protein 56 (Tmem56), transcript variant 1, mRNA. / Q8CGF5 / Q96MV1 / TMEM56 / TMEM56-RWDD3 / TMEM56-RWDD3 readthrough / transmembrane protein 56
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 15035090
Gene end: 15041846
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100762
Ensembl peptide - ENSDARP00000115826
NCBI entrez gene - 100137126     See in Manteia.
RefSeq - NM_001114723
RefSeq Peptide - NP_001108195
swissprot - F1Q640
swissprot - A9JTD6
ZFIN ID - ZDB-GENE-070912-350
Ensembl - ENSDARG00000057743
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM56ENSGALG00000005580Gallus gallus
 Q96MV1ENSG00000152078Homo sapiens
 TMEM56-RWDD3ENSG00000271092Homo sapiens
 Q8CGF5ENSMUSG00000028132Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmem56a / transmembrane protein 56a / Q96MV1* / TMEM56* / Q8CGF5* / TMEM56-RWDD3* / TMEM56-RWDD3 readthrough* / transmembrane protein 56* / Mus musculus transmembrane protein 56 (Tmem56), t...ENSDARG0000009845163
Q5XIY2 / tmem56b / transmembrane protein 56b / Q96MV1* / TMEM56* / Q8CGF5* / TMEM56-RWDD3* / TMEM56-RWDD3 readthrough* / transmembrane protein 56* / Mus musculus transmembrane protein 56 (T...ENSDARG0000009822450


Protein motifs (from Interpro)
Interpro ID Name
 IPR006634  TRAM/LAG1/CLN8 homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr