ENSDARG00000098224


Danio rerio

Features
Gene ID: ENSDARG00000098224
  
Biological name :tmem56b
  
Synonyms : Q5XIY2 / tmem56b / transmembrane protein 56b
  
Possible biological names infered from orthology : Mus musculus transmembrane protein 56 (Tmem56), transcript variant 1, mRNA. / Q8CGF5 / Q96MV1 / TMEM56 / TMEM56-RWDD3 / TMEM56-RWDD3 readthrough / transmembrane protein 56
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 14388010
Gene end: 14452325
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133377
Ensembl peptide - ENSDARP00000130550
NCBI entrez gene - 449652     See in Manteia.
RefSeq - NM_001005924
RefSeq - XM_005168477
RefSeq Peptide - NP_001005924
swissprot - Q5XIY2
swissprot - B2GQ47
ZFIN ID - ZDB-GENE-041010-90
Ensembl - ENSDARG00000098224
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM56ENSGALG00000005580Gallus gallus
 Q96MV1ENSG00000152078Homo sapiens
 TMEM56-RWDD3ENSG00000271092Homo sapiens
 Q8CGF5ENSMUSG00000028132Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmem56a / transmembrane protein 56a / Q96MV1* / TMEM56* / Q8CGF5* / TMEM56-RWDD3* / TMEM56-RWDD3 readthrough* / transmembrane protein 56* / Mus musculus transmembrane protein 56 (Tmem56), t...ENSDARG0000009845153
si:dkey-10f21.4 / TMEM56* / Q96MV1* / Q8CGF5* / TMEM56-RWDD3* / transmembrane protein 56* / TMEM56-RWDD3 readthrough* / Mus musculus transmembrane protein 56 (Tmem56), transcript variant 1, mRNA.*ENSDARG0000005774350


Protein motifs (from Interpro)
Interpro ID Name
 IPR006634  TRAM/LAG1/CLN8 homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr