ENSDARG00000057863


Danio rerio

Features
Gene ID: ENSDARG00000057863
  
Biological name :dnmt3bb.3
  
Synonyms : DNA (cytosine-5-)-methyltransferase beta, duplicate b.3 / dnmt3bb.3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 16961269
Gene end: 16981985
  
Corresponding Affymetrix probe sets: Dr.3118.1.A1_a_at (Zebrafish Array)   NM_001020479_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000046888
Ensembl peptide - ENSDARP00000122655
Ensembl peptide - ENSDARP00000118597
Ensembl peptide - ENSDARP00000106490
NCBI entrez gene - 323723     See in Manteia.
RefSeq - NM_001020479
RefSeq - XM_005162039
RefSeq Peptide - NP_001018315
swissprot - A3QJU7
swissprot - A3QJU9
swissprot - A3QJU8
ZFIN ID - ZDB-GENE-050314-2
Ensembl - ENSDARG00000057863
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dnmt3bb.2 / DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.2ENSDARG0000005783075
dnmt3ba / DNA (cytosine-5-)-methyltransferase 3 beta, duplicate aENSDARG0000005240235
dnmt3bb.1 / DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.1 / Q9UBC3* / DNMT3B* / Dnmt3c* / O88509* / DNA methyltransferase 3 beta* / DNA (cytosine-5)-methyltransferase 3B *ENSDARG0000003679127
dnmt3ab / DNA (cytosine-5-)-methyltransferase 3 alpha b / Q9Y6K1* / DNMT3A* / O88508* / DNA methyltransferase 3 alpha* / DNA (cytosine-5)-methyltransferase 3A *ENSDARG0000001556626
dnmt3aa / DNA (cytosine-5-)-methyltransferase 3 alpha a / Q9Y6K1* / DNMT3A* / O88508* / DNA methyltransferase 3 alpha* / DNA (cytosine-5)-methyltransferase 3A *ENSDARG0000000539424


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR001525  C-5 cytosine methyltransferase
 IPR025766  ADD domain
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032259 methylation IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr